Re-run this search with the SEG filter switched off
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= CPAR2_601790
(361 letters)
Database: Seq/AA.fsa
85,676 sequences; 40,655,052 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
CPAR2_601790 Chr6 complement(426692..427777) [1086 bp, 361 aa] P... 705 0.0 CORT0F02780 c6 complement(571218..572300) [1083 bp, 360 aa] hypo... 659 0.0 LELG_04815 c7 (549676..550761) [1086 bp, 361 aa] 580 0.0 CTRG_02900 c3 complement(1931013..1932098) [1086 bp, 361 aa] 517 0.0 CAWG_05164 c7 (626079..627161) [1083 bp, 360 aa] 512 0.0 CD36_62160 Chr6 complement(430403..431485) [1083 bp, 360 aa] si... 503 e-179 orf19.3508 Chr6 complement(416316..417449) [1134 bp, 377 aa] Pre... 501 e-178 SPAPADRAFT_143283 c7 complement(429048..430115) [1068 bp, 355 aa] 441 e-155 PICST_68225 Chr6 (1637909..1638991) [1083 bp, 360 aa] conserved ... 441 e-155 DEHA2E08206g Chr5 complement(647084..648172) [1089 bp, 362 aa] s... 426 e-149 CANTEDRAFT_113886 c15 complement(328652..329731) [1080 bp, 359 aa] 387 e-134 PGUG_05496 c7 (588645..589685) [1041 bp, 346 aa] 341 e-116 CLUG_03344 c4 (312176..313228) [1053 bp, 350 aa] 304 e-101 YKL151C Chr11 complement(164922..165935) [1014 bp, 337 aa] Putat... 234 4e-74 CANTEDRAFT_112880 c6 complement(1031763..1033394) [1632 bp, 543 ... 38 0.024 CLUG_04367 c5 (558902..561376) [2475 bp, 824 aa] 37 0.081 YKR028W Chr11 (493900..497196) [3297 bp, 1098 aa] Protein that f... 35 0.29 YNL262W Chr14 (148213..154881) [6669 bp, 2222 aa] Catalytic subu... 32 2.0 CTRG_05859 c10 complement(168137..170059) [1923 bp, 640 aa] 30 7.4
>CPAR2_601790 Chr6 complement(426692..427777) [1086 bp, 361 aa] Putative protein
of unknown function
Length = 361
Score = 705 bits (1820), Expect = 0.0, Method: Compositional matrix adjust. Identities = 348/361 (96%), Positives = 348/361 (96%)
Query: 1 MLLRNKSQKELITLSRQLIQPLLPNFHKGQAGRICIIGGNEDYTGAPFFSSHSAALVGAD 60
MLLRNKSQKELITLSRQLIQPLLPNFHKGQAGRICIIGGNEDYTGAPFFSSHSAALVGAD
Sbjct: 1 MLLRNKSQKELITLSRQLIQPLLPNFHKGQAGRICIIGGNEDYTGAPFFSSHSAALVGAD 60
Query: 61 LSHVICEKQAAPIIKSYSPDLMIHPYLLDLENPAXXXXXXXXXXXXXMSIEDVLNQTNVL 120
LSHVICEKQAAPIIKSYSPDLMIHPYLLDLENPA MSIEDVLNQTNVL
Sbjct: 61 LSHVICEKQAAPIIKSYSPDLMIHPYLLDLENPALKLKDGELEDLKKMSIEDVLNQTNVL 120
Query: 121 TKIIDDVILPKVQPLLTRMDIVVVGPGFGRDPLMLKSLVRIIEEIKVLNKPIVLDADSLY 180
TKIIDDVILPKVQPLLTRMDIVVVGPGFGRDPLMLKSLVRIIEEIKVLNKPIVLDADSLY
Sbjct: 121 TKIIDDVILPKVQPLLTRMDIVVVGPGFGRDPLMLKSLVRIIEEIKVLNKPIVLDADSLY 180
Query: 181 LLSIEPKLISNYSKAIITPNIVEFQRIATKLDIEIDISKDYSEQVLIDQTQKLSSKLGDV 240
LLSIEPKLISNYSKAIITPNIVEFQRIATKLDIEIDISKDYSEQVLIDQTQKLSSKLGDV
Sbjct: 181 LLSIEPKLISNYSKAIITPNIVEFQRIATKLDIEIDISKDYSEQVLIDQTQKLSSKLGDV 240
Query: 241 LVYRKGEVDIIANSKSVVLNNSSGSNKRVGGQGDTLTGAIATLVNWSNHYLDSYWDNKVD 300
LVYRKGEVDIIANSKSVVLNNSSGSNKRVGGQGDTLTGAIATLVNWSNHYLDSYWDNKVD
Sbjct: 241 LVYRKGEVDIIANSKSVVLNNSSGSNKRVGGQGDTLTGAIATLVNWSNHYLDSYWDNKVD 300
Query: 301 LDTNDAHILACYSAGTLVRLAGQKAFKKYGRSMQTSNIHEFLHEAFLELFDDSLFRFGSN 360
LDTNDAHILACYSAGTLVRLAGQKAFKKYGRSMQTSNIHEFLHEAFLELFDDSLFRFGSN
Sbjct: 301 LDTNDAHILACYSAGTLVRLAGQKAFKKYGRSMQTSNIHEFLHEAFLELFDDSLFRFGSN 360
Query: 361 M 361
M
Sbjct: 361 M 361
>CORT0F02780 c6 complement(571218..572300) [1083 bp, 360 aa] hypothetical
protein
Length = 360
Score = 659 bits (1700), Expect = 0.0, Method: Compositional matrix adjust. Identities = 321/361 (88%), Positives = 337/361 (93%), Gaps = 1/361 (0%)
Query: 1 MLLRNKSQKELITLSRQLIQPLLPNFHKGQAGRICIIGGNEDYTGAPFFSSHSAALVGAD 60
MLLR+KS KELI LSRQLIQPLLPNFHKGQAGRICIIGGNEDYTGAPFFSSHSAALVGAD
Sbjct: 1 MLLRSKSHKELIGLSRQLIQPLLPNFHKGQAGRICIIGGNEDYTGAPFFSSHSAALVGAD 60
Query: 61 LSHVICEKQAAPIIKSYSPDLMIHPYLLDLENPAXXXXXXXXXXXXXMSIEDVLNQTNVL 120
LSHV+CEKQAAPIIK+YSPDLMIHPYLLDLE+P +SIE+VLNQTNVL
Sbjct: 61 LSHVVCEKQAAPIIKTYSPDLMIHPYLLDLESPTLRLKDGELEDLKKLSIEEVLNQTNVL 120
Query: 121 TKIIDDVILPKVQPLLTRMDIVVVGPGFGRDPLMLKSLVRIIEEIKVLNKPIVLDADSLY 180
T IIDDVILPK+QPLLTRMDI+VVGPGFGRDPLMLKSLVRIIEEIKVLNKPIVLDADSLY
Sbjct: 121 TNIIDDVILPKIQPLLTRMDIIVVGPGFGRDPLMLKSLVRIIEEIKVLNKPIVLDADSLY 180
Query: 181 LLSIEPKLISNYSKAIITPNIVEFQRIATKLDIEIDISKDYSEQVLIDQTQKLSSKLGDV 240
LLSIEPKLI+NYSKAIITPNI EFQRIA KLDIE+DISKDYSE+ LI+QTQKLSSKLGDV
Sbjct: 181 LLSIEPKLITNYSKAIITPNIAEFQRIAKKLDIEVDISKDYSEEALIEQTQKLSSKLGDV 240
Query: 241 LVYRKGEVDIIANSKSVVLNNSSGSNKRVGGQGDTLTGAIATLVNWSNHYLDSYWDNKVD 300
LVYRKGEVDIIANSK+VVLNNS+GSNKRVGGQGDTLTGAIATLVNWSNHYLDS+WDNKVD
Sbjct: 241 LVYRKGEVDIIANSKNVVLNNSTGSNKRVGGQGDTLTGAIATLVNWSNHYLDSFWDNKVD 300
Query: 301 LDTNDAHILACYSAGTLVRLAGQKAFKKYGRSMQTSNIHEFLHEAFLELFDDSLFRFGSN 360
LD DAHILACYSAG+LVR AGQKAFKKYGRSMQTSNIHEFLHEAFLELFDDSLFRF SN
Sbjct: 301 LDATDAHILACYSAGSLVRSAGQKAFKKYGRSMQTSNIHEFLHEAFLELFDDSLFRF-SN 359
Query: 361 M 361
M
Sbjct: 360 M 360
>LELG_04815 c7 (549676..550761) [1086 bp, 361 aa]
Length = 361
Score = 580 bits (1494), Expect = 0.0, Method: Compositional matrix adjust. Identities = 275/361 (76%), Positives = 321/361 (88%), Gaps = 1/361 (0%)
Query: 2 LLRNKSQKELITLSRQLIQPLLPNFHKGQAGRICIIGGNEDYTGAPFFSSHSAALVGADL 61
+LRNKS KELI LS+ LIQPLLP FHKGQAG++C+IGGNEDYTGAPFFSSHSAALVGADL
Sbjct: 1 MLRNKSHKELIKLSQNLIQPLLPQFHKGQAGKVCVIGGNEDYTGAPFFSSHSAALVGADL 60
Query: 62 SHVICEKQAAPIIKSYSPDLMIHPYLLDLENPAXXXXXXXXXXXXXMSIEDVL-NQTNVL 120
SHVICEKQAAP+IKSY+PDLM+HPYLLDLENP+ +SIE++L + + VL
Sbjct: 61 SHVICEKQAAPVIKSYTPDLMVHPYLLDLENPSLKIDDDELHRLKNLSIEEILESNSGVL 120
Query: 121 TKIIDDVILPKVQPLLTRMDIVVVGPGFGRDPLMLKSLVRIIEEIKVLNKPIVLDADSLY 180
TKIIDD+ILPKVQ LL++ DIVVVGPGFGRDPLMLK+LVRIIEEIKVLNKP++LDADSLY
Sbjct: 121 TKIIDDLILPKVQTLLSKSDIVVVGPGFGRDPLMLKTLVRIIEEIKVLNKPLILDADSLY 180
Query: 181 LLSIEPKLISNYSKAIITPNIVEFQRIATKLDIEIDISKDYSEQVLIDQTQKLSSKLGDV 240
LLSI+P++I+NY+KAIITPN+VEFQRIA K +I+ID+SK YS+ LIDQTQ++S KLG+V
Sbjct: 181 LLSIQPQIITNYAKAIITPNVVEFQRIAKKFNIDIDLSKKYSQDTLIDQTQQISDKLGNV 240
Query: 241 LVYRKGEVDIIANSKSVVLNNSSGSNKRVGGQGDTLTGAIATLVNWSNHYLDSYWDNKVD 300
L+ RKGE DIIAN+K+VV+N+ GSNKRVGGQGDTLTGAIATLVNWSN+YLDS W NKV+
Sbjct: 241 LIIRKGENDIIANTKAVVVNSHPGSNKRVGGQGDTLTGAIATLVNWSNNYLDSVWGNKVE 300
Query: 301 LDTNDAHILACYSAGTLVRLAGQKAFKKYGRSMQTSNIHEFLHEAFLELFDDSLFRFGSN 360
LD +DAHILACY+AGTLVR+A KAFKKYGRSMQTSNIHEFLHEAF +LFDDS+FR SN
Sbjct: 301 LDADDAHILACYAAGTLVRVASDKAFKKYGRSMQTSNIHEFLHEAFRDLFDDSIFRLNSN 360
Query: 361 M 361
+
Sbjct: 361 I 361
>CTRG_02900 c3 complement(1931013..1932098) [1086 bp, 361 aa]
Length = 361
Score = 517 bits (1331), Expect = 0.0, Method: Compositional matrix adjust. Identities = 250/361 (69%), Positives = 303/361 (83%), Gaps = 4/361 (1%)
Query: 2 LLRNKSQKELITLSRQLIQPLLPNFHKGQAGRICIIGGNEDYTGAPFFSSHSAALVGADL 61
+LR KSQKELI LSRQLIQPLLP+FHKGQ+G+I +IGGNEDYTGAPFFSSHSAALVGADL
Sbjct: 1 MLRGKSQKELIHLSRQLIQPLLPSFHKGQSGKIAVIGGNEDYTGAPFFSSHSAALVGADL 60
Query: 62 SHVICEKQAAPIIKSYSPDLMIHPYLLDLENPAXXXXXXXXXXXXXMSIEDVL--NQTNV 119
SHVICEK AAP+IKSY+PDLM+HPYL+DL+NP + +++++ N V
Sbjct: 61 SHVICEKAAAPVIKSYTPDLMVHPYLVDLDNPTLRISDEELDNLKKLPLDEIIKSNDNAV 120
Query: 120 LTKIIDDVILPKVQPLLTRMDIVVVGPGFGRDPLMLKSLVRIIEEIKVLNKPIVLDADSL 179
L KIID+++LPKV LL R+DIVVVGPGFGRDPLMLKSLVRIIEEIKVLN PI+LDAD+L
Sbjct: 121 LNKIIDELVLPKVVSLLNRIDIVVVGPGFGRDPLMLKSLVRIIEEIKVLNLPIILDADAL 180
Query: 180 YLLSIEPKLISNYSKAIITPNIVEFQRIATKLDIEIDISKDYSEQVLIDQTQKLSSKLGD 239
+LLS++P+LISNY KAIITPN+VEFQRIA L I++ +S+ + LI+QTQ++S KLGD
Sbjct: 181 FLLSVKPQLISNYPKAIITPNVVEFQRIAKALSIDVSLSESDRSK-LIEQTQQVSKKLGD 239
Query: 240 VLVYRKGEVDIIANSKSVVLNNSSGSNKRVGGQGDTLTGAIATLVNWSNHYLDSYWDNKV 299
++V+RKGE DII S S ++N GSNKRVGGQGDTLTGAIATLVNWSN+Y+ WDNKV
Sbjct: 240 IIVFRKGEHDIIVKSDSYLINEVQGSNKRVGGQGDTLTGAIATLVNWSNNYILKVWDNKV 299
Query: 300 DLDTNDAHILACYSAGTLVRLAGQKAFKKYGRSMQTSNIHEFLHEAFLELFDD-SLFRFG 358
+++ ++A+ILACY+A +LVR A KAFKKYGR+MQTSNIHEFLHEAF+ELFDD SLFRF
Sbjct: 300 EMEQHEANILACYAASSLVRCACNKAFKKYGRAMQTSNIHEFLHEAFIELFDDSSLFRFS 359
Query: 359 S 359
+
Sbjct: 360 N 360
>CAWG_05164 c7 (626079..627161) [1083 bp, 360 aa]
Length = 360
Score = 512 bits (1319), Expect = 0.0, Method: Compositional matrix adjust. Identities = 244/357 (68%), Positives = 297/357 (83%), Gaps = 3/357 (0%)
Query: 2 LLRNKSQKELITLSRQLIQPLLPNFHKGQAGRICIIGGNEDYTGAPFFSSHSAALVGADL 61
+LRNKSQKEL+ LSRQLIQPLLPNFHKGQAG+I +IGGNEDYTGAPFF+SHSAALVGADL
Sbjct: 1 MLRNKSQKELLHLSRQLIQPLLPNFHKGQAGKIVVIGGNEDYTGAPFFASHSAALVGADL 60
Query: 62 SHVICEKQAAPIIKSYSPDLMIHPYLLDLENPAXXXXXXXXXXXXXMSIEDVL--NQTNV 119
SHVICEK A P+IKSYSPDLMIHPYL+DL+NP + I++++ N V
Sbjct: 61 SHVICEKAAGPVIKSYSPDLMIHPYLMDLDNPHLNLNNSELEKLKNLPIDEIIKTNDNAV 120
Query: 120 LTKIIDDVILPKVQPLLTRMDIVVVGPGFGRDPLMLKSLVRIIEEIKVLNKPIVLDADSL 179
L K+ID++ILPKV LL R+DIVVVGPGFGRDPLMLKSL+RIIEE+KVLN PI+LDADSL
Sbjct: 121 LNKLIDELILPKVTSLLNRIDIVVVGPGFGRDPLMLKSLIRIIEEVKVLNLPIILDADSL 180
Query: 180 YLLSIEPKLISNYSKAIITPNIVEFQRIATKLDIEIDISKDYSEQVLIDQTQKLSSKLGD 239
YL+S+ PK+I+NY KAIITPN+VEFQRIA L I++D+S+ ++ LIDQT ++S KLGD
Sbjct: 181 YLVSLSPKIIANYPKAIITPNVVEFQRIAKALSIDVDLSESNKDK-LIDQTIEVSRKLGD 239
Query: 240 VLVYRKGEVDIIANSKSVVLNNSSGSNKRVGGQGDTLTGAIATLVNWSNHYLDSYWDNKV 299
++V+RKGE D+I S ++N +GSNKRVGGQGDTLTGAIATLVNWSN+Y+ WDN+V
Sbjct: 240 IIVFRKGEHDLIVKSSKFLINEITGSNKRVGGQGDTLTGAIATLVNWSNNYILRLWDNQV 299
Query: 300 DLDTNDAHILACYSAGTLVRLAGQKAFKKYGRSMQTSNIHEFLHEAFLELFDDSLFR 356
DLD DA++LAC++A ++VR A KAF KYGRSMQTSN+HE+LHE+F ELF DS+FR
Sbjct: 300 DLDQEDANLLACFAASSVVRNASSKAFNKYGRSMQTSNVHEYLHESFTELFGDSIFR 356
>CD36_62160 Chr6 complement(430403..431485) [1083 bp, 360 aa] similar to AA
sequence:UniProt:Q59M69
Length = 360
Score = 503 bits (1295), Expect = e-179, Method: Compositional matrix adjust. Identities = 244/357 (68%), Positives = 296/357 (82%), Gaps = 3/357 (0%)
Query: 2 LLRNKSQKELITLSRQLIQPLLPNFHKGQAGRICIIGGNEDYTGAPFFSSHSAALVGADL 61
+LR+KSQKEL+ LSRQLIQPLLPNFHKGQAG+I +IGGNEDYTGAPFF+SHSAALVGADL
Sbjct: 1 MLRHKSQKELLHLSRQLIQPLLPNFHKGQAGKIVVIGGNEDYTGAPFFASHSAALVGADL 60
Query: 62 SHVICEKQAAPIIKSYSPDLMIHPYLLDLENPAXXXXXXXXXXXXXMSIEDVL--NQTNV 119
SHVICEK A P+IKSYSPDLMIHPYL+DL NP + IE+++ N V
Sbjct: 61 SHVICEKAAGPVIKSYSPDLMIHPYLMDLNNPHLNLNNSELEKLKSLPIEEIIKTNDNAV 120
Query: 120 LTKIIDDVILPKVQPLLTRMDIVVVGPGFGRDPLMLKSLVRIIEEIKVLNKPIVLDADSL 179
L K+ID++ILPKV LL R+DIVVVGPGFGRDPLMLKSL+RIIEE+KVLN PI+LDADSL
Sbjct: 121 LNKLIDELILPKVTSLLNRIDIVVVGPGFGRDPLMLKSLIRIIEEVKVLNLPIILDADSL 180
Query: 180 YLLSIEPKLISNYSKAIITPNIVEFQRIATKLDIEIDISKDYSEQVLIDQTQKLSSKLGD 239
YL+S+ PK+I+NY KAIITPN+VEFQRIA L I++D+S+ ++ LIDQT ++S KLGD
Sbjct: 181 YLVSLSPKIIANYPKAIITPNVVEFQRIAKALSIDVDLSESNKDK-LIDQTIEVSRKLGD 239
Query: 240 VLVYRKGEVDIIANSKSVVLNNSSGSNKRVGGQGDTLTGAIATLVNWSNHYLDSYWDNKV 299
++V+RKGE D+I S ++N +GSNKRVGGQGDTLTGAIATLVNWSN+Y+ WDN+V
Sbjct: 240 IIVFRKGEHDLIVKSSKFLINEFTGSNKRVGGQGDTLTGAIATLVNWSNNYILKLWDNQV 299
Query: 300 DLDTNDAHILACYSAGTLVRLAGQKAFKKYGRSMQTSNIHEFLHEAFLELFDDSLFR 356
DLD DA++LAC++A ++VR A KAF KYGRSMQTSNIHEFLH++F ELF DS++R
Sbjct: 300 DLDQEDANLLACFAASSIVRNASSKAFNKYGRSMQTSNIHEFLHDSFTELFGDSIYR 356
>orf19.3508 Chr6 complement(416316..417449) [1134 bp, 377 aa] Predicted ORF in
Assemblies 19, 20 and 21; protein detected by mass spec
in stationary phase cultures
Length = 377
Score = 501 bits (1289), Expect = e-178, Method: Compositional matrix adjust. Identities = 245/374 (65%), Positives = 299/374 (79%), Gaps = 20/374 (5%)
Query: 2 LLRNKSQKELITLSRQLIQPLLPNFHKGQAGRICIIGGNEDYTGAPFFSSHSAALVGADL 61
+LRNKSQKEL+ LSRQLIQPLLPNFHKGQAG+I +IGGNEDYTGAPFF+SHSAALVGADL
Sbjct: 1 MLRNKSQKELLHLSRQLIQPLLPNFHKGQAGKIVVIGGNEDYTGAPFFASHSAALVGADL 60
Query: 62 SHVICEKQAAPIIKSYSPDLMIHPYLLDLENPAXXXXXXXXXXXXXMSIEDVL--NQTNV 119
SHVICEK A P+IKSYSPDLMIHPYL+DL+NP + I++++ N V
Sbjct: 61 SHVICEKAAGPVIKSYSPDLMIHPYLMDLDNPHLNLNNSELEKLKNLPIDEIIKTNDNAV 120
Query: 120 LTKIIDDVILPKVQPLLTRMDIVVVGPGFGRDPLMLKSLVRIIEEIKVLNKPIVLDADSL 179
L K+ID++ILPKV LL R+DIVVVGPGFGRDPLMLKSL+RIIEE+KVLN PI+LDADSL
Sbjct: 121 LNKLIDELILPKVTSLLNRIDIVVVGPGFGRDPLMLKSLIRIIEEVKVLNLPIILDADSL 180
Query: 180 YLLSIEPKLISNYSKAIITPNIVEFQRIATKLDIEIDISKDYSEQVLIDQTQKLSSKLGD 239
YL+S+ PK+I+NY KAIITPN+VEFQRIA L I+ D+S+ ++ LIDQT ++S KLGD
Sbjct: 181 YLVSLSPKIIANYPKAIITPNVVEFQRIAKALSIDADLSESNKDK-LIDQTIEVSRKLGD 239
Query: 240 VLVYRKGEVDIIANSKSVVLNNSSGSNKRVGGQGDTLTGAIATLVNWSNHYL-------- 291
++V+RKGE D+I S ++N +GSNKRVGGQGDTLTGAIATLVNWSN+Y+
Sbjct: 240 IIVFRKGEHDLIVKSSKFLINEITGSNKRVGGQGDTLTGAIATLVNWSNNYILRLWDNQV 299
Query: 292 -----DSY----WDNKVDLDTNDAHILACYSAGTLVRLAGQKAFKKYGRSMQTSNIHEFL 342
++Y WDN+VDLD DA++LAC++A ++VR A KAF KYGRSMQTSN+HE+L
Sbjct: 300 VVNWSNNYILRLWDNQVDLDQEDANLLACFAASSVVRNASSKAFNKYGRSMQTSNVHEYL 359
Query: 343 HEAFLELFDDSLFR 356
HE+F ELF DS+FR
Sbjct: 360 HESFTELFGDSIFR 373
>SPAPADRAFT_143283 c7 complement(429048..430115) [1068 bp, 355 aa]
Length = 355
Score = 441 bits (1133), Expect = e-155, Method: Compositional matrix adjust. Identities = 213/350 (60%), Positives = 269/350 (76%), Gaps = 2/350 (0%)
Query: 2 LLRNKSQKELITLSRQLIQPLLPNFHKGQAGRICIIGGNEDYTGAPFFSSHSAALVGADL 61
+LRNKS KELI +SR L+QPLLP+FHKGQ+G++ +IGGNEDYTGAPFF+ HSAALVGADL
Sbjct: 1 MLRNKSPKELINISRNLVQPLLPHFHKGQSGKVTVIGGNEDYTGAPFFACHSAALVGADL 60
Query: 62 SHVICEKQAAPIIKSYSPDLMIHPYLLDLENPAXXXXXXXXXXXXXMSIEDVLNQTNVLT 121
SHVICE+ AAP+IKSY PDLMIHPYL DL+NPA ++DV+ +L
Sbjct: 61 SHVICERHAAPVIKSYLPDLMIHPYLYDLDNPAIKLAQAEIDQLRKTPLKDVITDGALLN 120
Query: 122 KIIDDVILPKVQPLLTRMDIVVVGPGFGRDPLMLKSLVRIIEEIKVLNKPIVLDADSLYL 181
IIDD+++PKV+ LL R DIVVVGPGFGRDPLM+KSLVRII+EIK ++ PI+LDADSL+L
Sbjct: 121 SIIDDLVMPKVKGLLARTDIVVVGPGFGRDPLMMKSLVRIIDEIKQMDLPIILDADSLFL 180
Query: 182 LSIEPKLISNYSKAIITPNIVEFQRIATKLDIEIDISKDYSEQVLIDQTQKLSSKLGDVL 241
+SI P +I Y KAIITPN+VEF RIA L I+ IS+ + LI++TQ +S KLG V
Sbjct: 181 ISIYPNIILGYKKAIITPNVVEFDRIAKTLGIDSSISEQ-NVNTLIEETQTMSKKLG-VT 238
Query: 242 VYRKGEVDIIANSKSVVLNNSSGSNKRVGGQGDTLTGAIATLVNWSNHYLDSYWDNKVDL 301
V RKG ++IA + ++N+ SGS++RVGGQGDTLTG++AT VNWS +YLD WD K D+
Sbjct: 239 VIRKGRQEVIAYQDTYLVNDFSGSSRRVGGQGDTLTGSLATFVNWSYNYLDKVWDTKGDI 298
Query: 302 DTNDAHILACYSAGTLVRLAGQKAFKKYGRSMQTSNIHEFLHEAFLELFD 351
DA +LACY+A +LVR + KAF K+GR+MQT+N+HE L AF ELF+
Sbjct: 299 LEGDAQVLACYAACSLVRSSAAKAFAKHGRAMQTTNVHECLPTAFAELFE 348
>PICST_68225 Chr6 (1637909..1638991) [1083 bp, 360 aa] conserved hypothetical
protein
Length = 360
Score = 441 bits (1134), Expect = e-155, Method: Compositional matrix adjust. Identities = 221/355 (62%), Positives = 275/355 (77%), Gaps = 7/355 (1%)
Query: 2 LLRNKSQKELITLSRQLIQPLLPNFHKGQAGRICIIGGNEDYTGAPFFSSHSAALVGADL 61
+LRNK+QKEL+ LSR +IQPLLP+F+KGQAG++ +IGG EDYTGAPFF +HSAALVGADL
Sbjct: 1 MLRNKTQKELLQLSRHIIQPLLPSFYKGQAGKVTVIGGCEDYTGAPFFGAHSAALVGADL 60
Query: 62 SHVICEKQAAPIIKSYSPDLMIHPYLLDLENPAXXXXXXXXXXXXXMSI--EDVL-NQTN 118
SHVICEK AAPIIK YSPDLM+HPYL DL NP + + ED+L N
Sbjct: 61 SHVICEKVAAPIIKLYSPDLMVHPYLYDLNNPEIKVDLSSQEIDQLLKLDYEDLLKNNYP 120
Query: 119 VLTKIIDDVILPKVQPLLTRMDIVVVGPGFGRDPLMLKSLVRIIEEIKVLNKPIVLDADS 178
L II++ +LPKV LL R DIVVVGPGFGRDPLMLKSL RIIEE+KVLNK I+LDADS
Sbjct: 121 SLNAIIENKVLPKVLKLLDRTDIVVVGPGFGRDPLMLKSLARIIEEVKVLNKHIILDADS 180
Query: 179 LYLLSIEPKLISNYSKAIITPNIVEFQRIATKLDIEIDISK-DYSEQVLIDQTQKLSSKL 237
L+L+S+ P LI NY KAI+TPN+VEFQR+A K I+ IS+ D+S L+D+T++LS L
Sbjct: 181 LFLVSLNPALIKNYPKAILTPNVVEFQRLALKFGIQTKISETDFS--ALLDETRRLSKLL 238
Query: 238 GDVLVYRKGEVDIIANSKSVVLNNSSGSNKRVGGQGDTLTGAIATLVNWSNHYLDSYWD- 296
G V + RKG+ ++I + V+N+ GSNKRVGGQGDTLTGA+ATLVNWSN+Y D WD
Sbjct: 239 GRVTILRKGKQELIVKNDDYVVNDIQGSNKRVGGQGDTLTGALATLVNWSNNYSDGLWDT 298
Query: 297 NKVDLDTNDAHILACYSAGTLVRLAGQKAFKKYGRSMQTSNIHEFLHEAFLELFD 351
+K L+ ++A++LAC++A LVR + KAFKKYGRSMQTSN+HEFL EA+ +LF+
Sbjct: 299 DKKVLNRDEANLLACFTASALVRFSAHKAFKKYGRSMQTSNVHEFLKEAYDDLFE 353
>DEHA2E08206g Chr5 complement(647084..648172) [1089 bp, 362 aa] similar to
uniprot|P36059 Saccharomyces cerevisiae YKL151C
Length = 362
Score = 426 bits (1095), Expect = e-149, Method: Compositional matrix adjust. Identities = 208/358 (58%), Positives = 275/358 (76%), Gaps = 9/358 (2%)
Query: 2 LLRNKSQKELITLSRQLIQPLLPNFHKGQAGRICIIGGNEDYTGAPFFSSHSAALVGADL 61
+L+NK+QKEL+ L R +IQPL PNFHKGQ+G+I +IGG+EDYTGAPFF+SHS+AL+GADL
Sbjct: 1 MLKNKTQKELLQLCRTIIQPLAPNFHKGQSGKIAVIGGSEDYTGAPFFASHSSALLGADL 60
Query: 62 SHVICEKQAAPIIKSYSPDLMIHPYLLDLENPAXXX--XXXXXXXXXXMSIED-VLNQTN 118
SH+ICEK A+P++K YSPDLM+HPYL +L++P +++ED V+
Sbjct: 61 SHIICEKMASPVLKLYSPDLMVHPYLYELQSPEMKEHLSKSEVDALLRLTVEDVVVKDQR 120
Query: 119 VLTKIIDDVILPKVQPLLTRMDIVVVGPGFGRDPLMLKSLVRIIEEIKVLNKPIVLDADS 178
L +II+DVILPK+ LL R+DIVV+GPGFGRDPLMLK+LV+IIE++KV+NKP++LDAD+
Sbjct: 121 QLDEIIEDVILPKIVGLLERIDIVVIGPGFGRDPLMLKTLVKIIEQLKVMNKPMILDADA 180
Query: 179 LYLLSIEPKLISNYSKAIITPNIVEFQRIATKLDIEIDISK-DYSEQVLIDQTQKLSSKL 237
LYLLSI+P L+ NYSKAIITPN+VEF R+A KL+++ I++ D S LI+ + LS KL
Sbjct: 181 LYLLSIDPLLVKNYSKAIITPNVVEFDRLAKKLNVKFSINETDVSN--LIESSINLSQKL 238
Query: 238 GDVLVYRKGEVDIIANSKSVVLNNSSGSNKRVGGQGDTLTGAIATLVNWSNHYLDSYWD- 296
G+V V +K +I+ ++N GSN+RVGGQGDTLTGAIAT VNWSN+Y D WD
Sbjct: 239 GNVTVIQKNFKEIMVRDGEYLINELEGSNRRVGGQGDTLTGAIATFVNWSNNYNDGLWDP 298
Query: 297 --NKVDLDTNDAHILACYSAGTLVRLAGQKAFKKYGRSMQTSNIHEFLHEAFLELFDD 352
K L + D ++LAC++A + VRLA KAF KYGRSMQTSN+HEFL +A+ ELF++
Sbjct: 299 TSKKDKLSSEDLNLLACFAASSTVRLAASKAFAKYGRSMQTSNVHEFLGKAYDELFEN 356
>CANTEDRAFT_113886 c15 complement(328652..329731) [1080 bp, 359 aa]
Length = 359
Score = 387 bits (995), Expect = e-134, Method: Compositional matrix adjust. Identities = 186/358 (51%), Positives = 262/358 (73%), Gaps = 6/358 (1%)
Query: 2 LLRNKSQKELITLSRQLIQPLLPNFHKGQAGRICIIGGNEDYTGAPFFSSHSAALVGADL 61
+LR KS +ELI LS+ +IQPLLPN +KGQAG++ +IGG EDYTGAP+F+S ++AL+G+DL
Sbjct: 1 MLRGKSHRELIELSKVIIQPLLPNLYKGQAGKVAVIGGCEDYTGAPYFASSASALIGSDL 60
Query: 62 SHVICEKQAAPIIKSYSPDLMIHPYLLDLENPAXXXXXX--XXXXXXXMSIEDVLNQT-N 118
+HVICEK AAPIIKSYSPDLM+HPYL D NP +S++DV+ +
Sbjct: 61 THVICEKVAAPIIKSYSPDLMVHPYLFDTGNPEITSQFLPDQMEELRTLSLKDVIKPSFK 120
Query: 119 VLTKIIDDVILPKVQPLLTRMDIVVVGPGFGRDPLMLKSLVRIIEEIKVLNKPIVLDADS 178
+L I+ +LPKV L+ R DI ++GPGFGRD LM+KS+++I+E+IKV NKP++LDAD+
Sbjct: 121 LLDGFIESKVLPKVLGLIDRCDIFIIGPGFGRDSLMVKSMIKILEQIKVANKPVILDADA 180
Query: 179 LYLLSIEPKLISNYSKAIITPNIVEFQRIATKLDIEIDISKDYSEQVLIDQTQKLSSKLG 238
L+++S++P +I Y KAI+TPN++EF+RIA+ IE I K+ +++ +LS+KLG
Sbjct: 181 LFVVSLDPTIIQGYKKAILTPNLIEFERIASHFGIE-SILKETRLDPILNAVSQLSTKLG 239
Query: 239 DVLVYRKGEVDIIANSKSVVLNNSSGSNKRVGGQGDTLTGAIATLVNWSNHYLDSYWDNK 298
V V RK +II + ++ ++N+ SGS +R+GGQGDTLTG +AT VNWS HY WDN+
Sbjct: 240 -VTVMRKSNAEIIVDGENHLINDLSGSARRIGGQGDTLTGCLATFVNWSYHYQAGLWDNE 298
Query: 299 -VDLDTNDAHILACYSAGTLVRLAGQKAFKKYGRSMQTSNIHEFLHEAFLELFDDSLF 355
L+ D+ +LACY++ +VRLA +KAFK+YGR+MQTS+I FL EA+ EL+D F
Sbjct: 299 GPKLNAQDSTLLACYASSAIVRLASRKAFKRYGRAMQTSDIQRFLGEAYTELYDSEEF 356
>PGUG_05496 c7 (588645..589685) [1041 bp, 346 aa]
Length = 346
Score = 341 bits (874), Expect = e-116, Method: Compositional matrix adjust. Identities = 169/350 (48%), Positives = 235/350 (67%), Gaps = 11/350 (3%)
Query: 1 MLLRNKSQKELITLSRQLIQPLLPNFHKGQAGRICIIGGNEDYTGAPFFSSHSAALVGAD 60
M + +KS+ EL+TL+R L+QPL FHKGQAG+I +IGG+EDYTGAPFF++HSAA VGAD
Sbjct: 1 MSIAHKSRTELLTLARTLVQPLSSRFHKGQAGKIAVIGGSEDYTGAPFFAAHSAATVGAD 60
Query: 61 LSHVICEKQAAPIIKSYSPDLMIHPYLLDLENPAXXXXXXXXXXXXXMSIEDVLNQTNVL 120
LSHV+CE AA +IKSYSPDLM+HPYL + A + +E + +
Sbjct: 61 LSHVVCEIGAATVIKSYSPDLMVHPYLQE----AAHAPKAIGDKVRKIPLEKLPEANAEV 116
Query: 121 TKIIDDVILPKVQPLLTRMDIVVVGPGFGRDPLMLKSLVRIIEEIKVLNKPIVLDADSLY 180
+D+ ++PKV LL R+D+VV+GPGFGRD LML++LV+I+E+IKV+NKP++LDAD+L+
Sbjct: 117 DSYVDENVMPKVLALLERIDVVVLGPGFGRDHLMLRTLVKILEQIKVMNKPVILDADALF 176
Query: 181 LLSIEPKLISNYSKAIITPNIVEFQRIATKLDIEIDISKDYSEQVLIDQTQKLSSKLGDV 240
L++ P ++ NY AI+TPN+VEF R+A + +D D + D +LS LG V
Sbjct: 177 LVAKAPLVVKNYKNAILTPNVVEFGRLAEA--VGVDPKADSA-----DGAMQLSKALGGV 229
Query: 241 LVYRKGEVDIIANSKSVVLNNSSGSNKRVGGQGDTLTGAIATLVNWSNHYLDSYWDNKVD 300
V RKG +IIA V++++ G +RVGGQGDTLTGAIAT V W+ +Y WD +
Sbjct: 230 TVVRKGAQEIIAQEDLHVVSDAPGLPRRVGGQGDTLTGAIATFVAWAQNYHRGLWDVSTN 289
Query: 301 LDTNDAHILACYSAGTLVRLAGQKAFKKYGRSMQTSNIHEFLHEAFLELF 350
L + I+AC++A +VR A + AF R+MQTS++H L EA+ L
Sbjct: 290 LSKQELRIIACFAAANVVREASRLAFASKRRAMQTSDVHNHLGEAYETLI 339
>CLUG_03344 c4 (312176..313228) [1053 bp, 350 aa]
Length = 350
Score = 304 bits (778), Expect = e-101, Method: Compositional matrix adjust. Identities = 165/359 (45%), Positives = 235/359 (65%), Gaps = 17/359 (4%)
Query: 2 LLRNKSQKELITLSRQLIQPLLPNFHKGQAGRICIIGGNEDYTGAPFFSSHSAALVGADL 61
+L KS KEL+ L+R L+ L + HKGQAG+I + GG EDYTGAPFF++H+AA+VGADL
Sbjct: 1 MLSGKSHKELLQLARGLVPQLKASMHKGQAGKIGVFGGCEDYTGAPFFAAHAAAIVGADL 60
Query: 62 SHVICEKQAAPIIKSYSPDLMIHPYLLDLENPAXXXXXXXXXXX--XXMSIEDVLNQTNV 119
SHV+CE+ AAPIIK YSPDLM+HPYL L+N +E+ L +
Sbjct: 61 SHVVCERLAAPIIKGYSPDLMVHPYLYALDNVEVERFAPREVWKNLARQPLEEGL-EVGA 119
Query: 120 LTKIIDDVILPKVQPLLTRMDIVVVGPGFGRDPLMLKSLVRIIEEIKVLNKPIVLDADSL 179
+ K++++ ILPK+ L+ R+D+ VVGPGFGRDPLML +L R++EEIKV +K +VLDAD+L
Sbjct: 120 VKKVVEEHILPKLAGLVERLDVFVVGPGFGRDPLMLATLARVVEEIKVADKTVVLDADAL 179
Query: 180 YLLSIEPKLISNYSKAIITPNIVEFQRIATKLDIEIDISKDYSEQVLIDQTQKLSSKLGD 239
+L+S P L+S Y KA++TPN+VEF R+ + +D S D + LS LG
Sbjct: 180 FLVSKRPSLVSGYKKAVLTPNVVEFARLCEA--VGVDSSSDGA-------ACALSQALGG 230
Query: 240 VLVYRKGEVDIIANSKSVVLNNSSGSNKRVGGQGDTLTGAIATLVNWSNHY--LDSYWDN 297
V+V RKG + I V+N+ GS +RVGGQGD+L G +AT++ W+ HY D +
Sbjct: 231 VIVVRKGGAEEIVRGDKRVVNDMDGSPRRVGGQGDSLAGTMATMLVWAGHYDRGDLSLEP 290
Query: 298 KV---DLDTNDAHILACYSAGTLVRLAGQKAFKKYGRSMQTSNIHEFLHEAFLELFDDS 353
V + ++ ++AC++A +VR+A +AF K+GR+MQTS++H L EA E+ D+
Sbjct: 291 GVRGQRMGADELALVACFAASAVVRVALARAFAKHGRAMQTSDVHACLGEACHEVLGDA 349
>YKL151C Chr11 complement(164922..165935) [1014 bp, 337 aa] Putative protein
of unknown function; green fluorescent protein
(GFP)-fusion protein localizes to the cytoplasm
Length = 337
Score = 234 bits (596), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 141/372 (37%), Positives = 212/372 (56%), Gaps = 59/372 (15%)
Query: 2 LLRNKSQKELITLS-RQLIQPLLPNFHKGQAG-RICIIGGNEDYTGAPFFSSHSAALVGA 59
+L S +ELI L+ ++ I PLLP FHKGQ+G R+CIIGG EDYTGAP+FS+++ AL+G
Sbjct: 1 MLAELSHRELIKLAQKRCIPPLLPKFHKGQSGGRVCIIGGCEDYTGAPYFSANATALMGC 60
Query: 60 DLSHVICEKQAAPIIKSYSPDLMIHPYLLDLENPAXXXXXXXXXXXXXMSIEDVLNQTNV 119
DL+HVICE A +IKSY+P+LM+HPY L +N
Sbjct: 61 DLTHVICEYNAGTVIKSYTPNLMVHPY---------------------------LRMSNT 93
Query: 120 LTKIIDDVILPKVQPLLTRMDIVVVGPGFGRDPLMLKS---LVRIIEEIKVLNKPIVLDA 176
+ D K+ LL R+ +VV+GPG GRDPLMLKS ++R I E P+V+DA
Sbjct: 94 KLDVDMDEQRKKINSLLDRIHVVVIGPGLGRDPLMLKSIKDIIRYILEKHEGKIPLVIDA 153
Query: 177 DSLYLLSIE---PKLISNYSKA--IITPNIVEFQRIATKLDIEIDISKDYSEQVLIDQTQ 231
D L+L++ + +++ +Y K I+TPN+VEF+R+ + + D + + Q
Sbjct: 154 DGLFLVTQDSEVKEMLKSYPKGRVILTPNVVEFKRLCDAIGKKGDSHSEMGSLI----AQ 209
Query: 232 KLSSKLGDVLVYRKGEVDII---ANSKSVVLNNSSGSNKRVGGQGDTLTGAIATLVNWSN 288
+L + +V KG+ D I + K ++ N+ GSNKRVGGQGDTLTGAI+ ++ +S
Sbjct: 210 EL-----NCIVVEKGQSDKIFSPDSEKDMLTNSEEGSNKRVGGQGDTLTGAISCMLAFSR 264
Query: 289 HYLD---SYWDNKVDLDTN-------DAHILACYSAGTLVRLAGQKAFKKYGRSMQTSNI 338
D + K + + D +L+CY+ T+ R + FK GR+MQT+++
Sbjct: 265 AMYDFKICEQEEKGESSNDKPLKNWVDYAMLSCYAGCTITRECSRLGFKAKGRAMQTTDL 324
Query: 339 HEFLHEAFLELF 350
++ + E F +LF
Sbjct: 325 NDRVGEVFAKLF 336
>CANTEDRAFT_112880 c6 complement(1031763..1033394) [1632 bp, 543 aa]
Length = 543
Score = 38.1 bits (87), Expect = 0.024, Method: Compositional matrix adjust. Identities = 63/254 (24%), Positives = 102/254 (40%), Gaps = 34/254 (13%)
Query: 117 TNVLTKIIDDVILPKVQPLLTRMDIVVVGPGFGRDPLMLKSLVRIIEEIKVLNKPIVLDA 176
T +LT +I +++ P ++ ++VG L S+V + E+++ N P+ D
Sbjct: 128 TFLLTALIAILVVLMFHPYVSWTGWILVGSAAA----TLISIVFLFLELRLSNSPVQSDV 183
Query: 177 DSL-YLLSIEPKLISNYS-KAIITPNIVEFQRIATKLDIEIDISKDYSEQVLIDQ-TQKL 233
+S+ + + + K + A + PN F R + LD + ISKDY + +Q ++
Sbjct: 184 ESINEMATFDNKFGAGPPVGAFMPPNSTAFNRGYSNLDNDSSISKDYEFKATGNQVNNQV 243
Query: 234 SSKLGDVLVYRKGEVDIIANSKSVVLNNSSGSNKRVGGQGDTLTGAIATLVNWSNHYLDS 293
S + + +Y +A + NNS GS R G A VN N + S
Sbjct: 244 SKTMTNSSIYNSNPQ--MAKDFTQYSNNSFGS--RTAGSSH-FEDAQVNFVNGPNTPISS 298
Query: 294 -------YWDNKVDLDTNDA------HILACYSAGTLVRLAGQKAFKKYGRSMQTSNIHE 340
+ N TND H+ Y AG R + + G M H
Sbjct: 299 KQQMAPTFVPNTATPTTNDTPESRVPHL--PYPAG---RPLNKPPYG--GADMSVFEHHP 351
Query: 341 FL--HEAFLELFDD 352
+ HE F EL DD
Sbjct: 352 EVEGHEPFTELNDD 365
>CLUG_04367 c5 (558902..561376) [2475 bp, 824 aa]
Length = 824
Score = 36.6 bits (83), Expect = 0.081, Method: Compositional matrix adjust. Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 11/79 (13%)
Query: 140 DIVVVGPGFGRDPLMLKSLVRIIEEIKV-----LNKPIVLDADSLYLLSI------EPKL 188
D VV PG P ++ + ++E K+ L+KPI DADS+ ++ P+L
Sbjct: 475 DFVVQSPGIVNPPTLMLAFTYLLERAKLSDFENLDKPINFDADSITQSNLGQVVVHNPQL 534
Query: 189 ISNYSKAIITPNIVEFQRI 207
+ NY+++I + ++R
Sbjct: 535 LKNYTRSIYPKLKLHYERF 553
>YKR028W Chr11 (493900..497196) [3297 bp, 1098 aa] Protein that forms a
complex with the Sit4p protein phosphatase and is
required for its function; member of a family of similar
proteins including Sap4p, Sap155p, and Sap185p
Length = 1098
Score = 34.7 bits (78), Expect = 0.29, Method: Compositional matrix adjust. Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 204 FQRIATKLDIEIDISKDYSEQVLIDQTQKLSSKLGDVLVYRKGEVDIIANSKSV-VLNNS 262
F A +E K+YSE +L D +K ++ LGD ++ + D+I NS S ++ ++
Sbjct: 732 FCNTAVSDRLEEPFWKEYSETILADTREKYNTVLGDFGNDQESDDDVIRNSDSEDIIGDT 791
Query: 263 SGSNKRVGGQGDTL 276
G+ G+ D L
Sbjct: 792 EGNENYGNGENDEL 805
>YNL262W Chr14 (148213..154881) [6669 bp, 2222 aa] Catalytic subunit of DNA
polymerase (II) epsilon, one of the major chromosomal DNA
replication polymerases characterized by processivity and
proofreading exonuclease activity; also involved in DNA
synthesis during DNA repair
Length = 2222
Score = 32.3 bits (72), Expect = 2.0, Method: Compositional matrix adjust. Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 11/85 (12%)
Query: 244 RKGEVDIIANSKSVVLNNSSGSNKRVGGQGDTLTGAIATLVNWSNHYLDSYWDNKVDLDT 303
R+GE+ +I N +S + +V +GDTL G + + + N +LD + + L+
Sbjct: 988 RRGELQLIKNFQSDIF--------KVFLEGDTLEGCYSAVASVCNRWLDVLDSHGLMLED 1039
Query: 304 NDAHILACYS---AGTLVRLAGQKA 325
D L C + + TL GQK+
Sbjct: 1040 EDLVSLICENRSMSKTLKEYEGQKS 1064
>CTRG_05859 c10 complement(168137..170059) [1923 bp, 640 aa]
Length = 640
Score = 30.0 bits (66), Expect = 7.4, Method: Compositional matrix adjust. Identities = 33/121 (27%), Positives = 51/121 (42%), Gaps = 22/121 (18%)
Query: 183 SIEPKLISNYSKAIITPNIVEFQRIATK--------LDIEIDISKDYSEQVLIDQTQKLS 234
S EP LI N I+ P V +R + K +D + K+ E+ LI + +
Sbjct: 343 SFEP-LIDNIYSEILKPKAVVKKRRSRKSSTIKNDIVDFRQGLIKERVEEALIQEV--ID 399
Query: 235 SKLGDVLVYRKGEVD--------IIANSKSVVLNNSSGSNKRVGGQGDTLTGAIATLVNW 286
G +V +K + I++N+KS L S S VG GD T ++ NW
Sbjct: 400 DHDGFTVVGKKSKQKSPPPNSEPILSNTKSETLTKSHTS---VGHTGDVATAGLSPFSNW 456
Query: 287 S 287
+
Sbjct: 457 A 457
Database: Seq/AA.fsa
Posted date: Feb 8, 2013 12:45 PM
Number of letters in database: 40,655,052
Number of sequences in database: 85,676
Lambda K H
0.319 0.137 0.388
Gapped Lambda K H 0.267 0.0410 0.140
Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 85676 Number of Hits to DB: 28,809,804 Number of extensions: 1257153 Number of successful extensions: 3732 Number of sequences better than 10.0: 39 Number of HSP's gapped: 3825 Number of HSP's successfully gapped: 39 Length of query: 361 Length of database: 40,655,052 Length adjustment: 109 Effective length of query: 252 Effective length of database: 31,316,368 Effective search space: 7891724736 Effective search space used: 7891724736 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 65 (29.6 bits)